Multi-omic profiling of follicular lymphoma reveals changes in tissue architecture and enhanced stromal remodeling in high-risk patients

Follicular lymphoma (FL) is a generally incurable malignancy that evolves from developmentally blocked germinal center (GC) B cells. To promote survival and immune escape, tumor B cells undergo significant genetic changes and extensively remodel the lymphoid microenvironment. Dynamic interactions between tumor B cells and the tumor microenvironment (TME) are hypothesized to contribute to the broad spectrum of clinical behaviors observed among FL patients. Despite the urgent need, existing clinical tools do not reliably predict disease behavior. Using a multi-modal strategy, we examined cell-intrinsic and -extrinsic factors governing progression and therapeutic outcomes in FL patients enrolled onto a prospective clinical trial. By leveraging the strengths of each platform, we identify several tumor-specific features and microenvironmental patterns enriched in individuals who experience early relapse, the most high-risk FL patients. These features include stromal desmoplasia and changes to the follicular growth pattern present 20 months before first progression and first relapse.

• Radtke, A. J.
• Postovalova, E.
• Varlamova, A.
• Bagaev, A.
• Sorokina, M.
• Kudryashova, O.
• Meerson, M.
• Polyakova, M.
• Galkin, I.
• Svekolkin, V.
• Isaev, S.
• Wiebe, D.
• Sharun, A.
• Sarachakov, A.
• Perelman, G.
• Lozinsky, Y.
• Yaniv, Z.
• Lowekamp, B. C.
• Speranza, E.
• Yao, L.
• Pittaluga, S.
• Shaffer, A. L., 3rd
• Jonigk, D.
• Phelan, J. D.
• Davies-Hill, T.
• Huang, D. W.
• Ovcharov, P.
• Nomie, K.
• Nuzhdina, E.
• Kotlov, N.
• Ataullakhanov, R.
• Fowler, N.
• Kelly, M.
• Muppidi, J.
• Davis, J. L.
• Hernandez, J. M.
• Wilson, W. H.
• Jaffe, E. S.
• Staudt, L. M.
• Roschewski, M.
• Germain, R. N.